{"id":6229,"date":"2016-09-05T07:44:41","date_gmt":"2016-09-05T06:44:41","guid":{"rendered":"http:\/\/www.walkingrandomly.com\/?p=6229"},"modified":"2016-09-05T13:10:53","modified_gmt":"2016-09-05T12:10:53","slug":"reproducible-research-in-ecology","status":"publish","type":"post","link":"https:\/\/walkingrandomly.com\/?p=6229","title":{"rendered":"Reproducible research in Ecology"},"content":{"rendered":"<p>One of the great things about being a <a href=\"http:\/\/rse.shef.ac.uk\/\">Research Software Engineer<\/a> is the diversity of work you can get involved with. I s<a href=\"https:\/\/www.walkingrandomly.com\/?p=5997\">pecialise in smaller interventions<\/a> which means that I can be working with physicists on Monday, engineers on Tuesday, geneticists on Wednesday&#8230;.you get the idea.<\/p>\n<p>Last month, I got to work with some Ecologists along with <a href=\"https:\/\/twitter.com\/annakrystalli\">Anna Krystalli<\/a>. We undertook the arduous journey from Sheffield down to Exeter to deliver talks and workshops at a\u00a0<a href=\"https:\/\/malikaihle.wordpress.com\/openscienceworkshop\/\">post-conference symposium on reproducibility in science<\/a>,\u00a0organised\u00a0by\u00a0<a href=\"https:\/\/malikaihle.wordpress.com\/\">Malika Ihle<\/a>\u00a0and <a href=\"https:\/\/sites.google.com\/site\/isabelwinney\/\">Isabel Winney<\/a>,\u00a0at the <a href=\"http:\/\/www.isbe2016.com\/\">International Symposium on Behavioural Ecology<\/a>.<\/p>\n<p>I gave my talk, <a href=\"https:\/\/github.com\/mikecroucher\/MLPM_talk\">Is your research software correct?<\/a>, and also delivered a <a href=\"https:\/\/github.com\/mikecroucher\/ISBE_Symposium\">workshop on using projects and version control using R and RStudio<\/a> in the <a href=\"https:\/\/www.walkingrandomly.com\/?p=5981\">Code Cafe<\/a> style. For the full write up of the day, see the excellent blog post\u00a0by Anna over at the <a href=\"https:\/\/science.mozilla.org\/blog\/2016-isbe-review\">Mozilla Science Lab blog<\/a>.<\/p>\n<p><strong>Updates : More resources<\/strong><\/p>\n<ul>\n<li><a href=\"http:\/\/www.cell.com\/trends\/ecology-evolution\/abstract\/S0169-5347(15)00290-6\">Elevating the status of code in Ecology<\/a>. Thanks to <a href=\"https:\/\/twitter.com\/katerererena\">@katerererena<\/a> for pointing this one out to me.<\/li>\n<li><a href=\"https:\/\/annakrystalli.github.io\/UNAM\/collab_gh_intro.nb.html\">Anna Krystalli&#8217;s course material<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>One of the great things about being a Research Software Engineer is the diversity of work you can get involved with. I specialise in smaller interventions which means that I can be working with physicists on Monday, engineers on Tuesday, geneticists on Wednesday&#8230;.you get the idea. Last month, I got to work with some Ecologists [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[78,80,12,67,42,79],"tags":[],"class_list":["post-6229","post","type-post","status-publish","format-standard","hentry","category-open-data-science","category-rse","category-science","category-scientific-software","category-tutorials","category-university-of-sheffield"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_shortlink":"https:\/\/wp.me\/p3swhs-1Ct","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/posts\/6229","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=6229"}],"version-history":[{"count":4,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/posts\/6229\/revisions"}],"predecessor-version":[{"id":6235,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=\/wp\/v2\/posts\/6229\/revisions\/6235"}],"wp:attachment":[{"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=6229"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=6229"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/walkingrandomly.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=6229"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}